Sequence psML004xD08f

Sequence: psML004xD08f(Phytophthora sojae)	Genbank accession: CF855392
Belongs to unigene:	CL1227Contig1
Primary annotation:	unknown protein

View sequence Alignment with Genome	Click Here
Other members of unigene:	psML004xD08f \|psMA009xB05f \|psMA002xC24f \|

In sequence marked regions are: vector, adaptor, low-quality, ployA/T trimming sites

001 GTTTGTACAAAAAACAGCTGGTACCGGTCCGGNATTCCCGGGNACCTGTTTCCGCTTGGCGACGACTGTGTAGCTGTCTAGCAGGTGCGGCATGC 095
096 GTGTCGTGCTGCCTCGCCAGCGCCGCCCAGGCACCGCTATCGGCGCGAGTGCTACTCGCCCAGNAGCGTGTACGTCCAGCCGGTCGTCGTGAAGG 190
191 AGTACTACCCGCCTCCACCTCCGCAGCAGCAGCAGCAAGGATACCCCTACGCAAGGCCTGTAGGCAAGGCATGATCCAGTGGGGGCAAAGTGGAT 285
286 TAGGCAGCGCGAAAACTCGACAGCTAACGATAGAGCTGTATGTTAGGACAGCAGCTTCCTTGGAGATATTTTTTTGATATAATATAGGTATAAAG 380
381 ACAAAAAAAAAAAAAAAAAAAAGGGCGGCCGCTCTAGATATCCCTCGGAGGGCCCAAGCTTACGCGTACCCAGCTTTCTTGTACAAAGTGGTCCC 475
476 TATAGTGAGTCGTATTATAAGCTAGGCACTGGCCGTCGTTTTACAACGTCGTGACTGGGGAAAACTGCTAGCTTGGGGATCTTTGTGGAAGGAAC 570
571 CTTACTTCT

Quality Plot

Quality Score

001   14 14 29 28 22 13 13 13 19 19 46 14 14 15 17 15 16 24 24 29 23 22 22 22 22 25 33 26 26 19  030
031   19 4 0 4 13 11 21 21 33 20 19 4 0 4 9 19 19 33 33 39 34 34 34 34 40 40 39 39 39 34  060
061   34 32 19 19 9 9 9 19 21 23 23 22 22 22 25 29 33 19 16 6 6 9 16 16 22 27 40 46 46 29  090
091   29 29 29 29 29 40 40 40 40 40 40 39 40 40 40 39 35 35 35 35 35 28 22 22 22 22 22 29 34 33  120
121   32 19 16 6 6 8 19 19 33 34 26 22 16 19 19 19 28 39 39 28 23 10 9 9 9 23 24 34 33 33  150
151   33 27 34 32 20 19 11 4 0 4 9 19 21 33 33 33 34 34 34 34 33 33 32 32 32 33 39 39 39 40  180
181   40 40 45 34 34 19 19 12 16 16 19 22 22 29 35 40 40 45 45 45 40 40 40 40 33 32 33 33 33 33  210
211   35 35 28 29 28 28 28 28 32 35 35 39 40 40 40 35 35 25 23 22 22 22 22 31 45 35 28 25 25 25  240
241   25 25 25 22 22 22 28 39 39 34 34 34 34 34 34 35 35 35 35 35 35 34 34 34 34 34 35 35 45 45  270
271   45 56 51 51 56 51 28 25 25 21 21 28 28 22 22 22 28 45 45 45 45 45 45 38 40 26 25 12 12 11  300
301   19 19 34 34 32 34 34 35 35 35 35 35 35 35 35 35 23 22 17 22 22 28 28 35 35 35 35 35 51 35  330
331   35 35 35 35 35 35 35 35 35 35 35 39 40 40 40 29 28 20 13 13 11 13 13 24 29 37 56 56 45 32  360
361   32 32 32 32 32 35 35 37 37 40 37 37 40 40 37 39 29 26 26 15 17 10 19 14 22 18 22 22 33 33  390
391   30 30 30 28 33 33 37 42 37 27 27 13 13 30 32 44 40 40 46 33 33 32 27 19 15 7 7 9 9 16  420
421   17 29 29 25 19 15 8 7 9 9 25 31 48 48 27 26 21 21 21 26 29 29 29 29 29 29 32 34 34 28  450
451   26 22 22 22 26 32 35 35 31 32 29 29 29 29 17 16 13 9 9 13 24 31 33 25 19 17 13 9 9 15  480
481   18 26 29 27 26 29 23 17 16 23 23 29 29 27 26 26 24 26 24 24 24 20 23 25 24 18 22 24 25 24  510
511   24 26 26 27 34 24 23 21 19 17 10 10 9 19 24 23 16 14 15 15 16 11 11 10 10 15 19 20 29 17  540
541   18 16 18 12 12 14 21 23 20 10 12 10 10 13 17 13 16 11 17 12 14 9 8 13 6 6 6 8 10 18  570
571   19 20 21 22 15 15 13 16 14

Oomycetes Soybean EST Database Version 3.0

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